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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G62420.1
PEP
AT3G62420.1
Position on the Genome Chromosome Chr3
Start Position 23091844
End Position 23092284
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00582614
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Basic-leucine zipper domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
bZIP transcription factor 53
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00170
Pfam Description Details
InterPro ID
IPR004827
InterPro Description Details
GO ID
GO:0043565,GO:0045893,GO:0009267,GO:0003700,GO:0045735,GO:2000693,GO:0000976,GO:0005634,GO:0046982,GO:0006971
GO Description Details
GOslim ID
GO:0007154,GO:0050789,GO:0032501,GO:0003676,GO:0065009,GO:0050896,GO:0006351,GO:0005515,GO:0032502,GO:0000003,GO:0005634,GO:0045735
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bZIP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
bZIP transcription factor 53
OrthoDB(1 item)
210761at33090
Basic-leucine zipper domain
Pfam(1 item)
 
bZIP transcription factor
InterPro(1 item)
 
Basic-leucine zipper domain
Gene ontology(10 items)
MF
sequence-specific DNA binding
BP
positive regulation of transcription, DNA-templated
BP
cellular response to starvation
MF
DNA-binding transcription factor activity
MF
nutrient reservoir activity
BP
positive regulation of seed maturation
MF
transcription regulatory region sequence-specific DNA binding
MF
protein heterodimerization activity
BP
hypotonic response
GO slim(12 items)
BP
cell communication
BP
regulation of biological process
BP
multicellular organismal process
MF
nucleic acid binding
BP
regulation of molecular function
BP
response to stimulus
BP
transcription, DNA-templated
MF
protein binding
BP
developmental process
MF
nutrient reservoir activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.