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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G62330.1
PEP
AT3G62330.1
Position on the Genome Chromosome Chr3
Start Position 23063329
End Position 23065419
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00590349
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, CCHC-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
CCHC-type domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR036875,IPR001878
InterPro Description Details
GO ID
GO:0003676,GO:0008270
GO Description Details
GOslim ID
GO:0003676,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
CCHC-type domain-containing protein
OrthoDB(1 item)
104065at33090
Zinc finger, CCHC-type
InterPro(2 items)
 
Zinc finger, CCHC-type
Gene ontology(2 items)
MF
nucleic acid binding
MF
zinc ion binding
GO slim(2 items)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.