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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G61890.1
PEP
AT3G61890.1
Position on the Genome Chromosome Chr3
Start Position 22914346
End Position 22915239
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00637744
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homeobox domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Homeobox-leucine zipper protein ATHB-12
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02183,PF00046
Pfam Description Details
InterPro ID
IPR009057,IPR017970,IPR003106,IPR001356,IPR000047
InterPro Description Details
GO ID
GO:0009414,GO:0007275,GO:0043565,GO:0000981,GO:0009615,GO:0009737,GO:0006970,GO:0045893,GO:0003700,GO:0005634
GO Description Details
GOslim ID
GO:0065009,GO:0050789,GO:0003676,GO:0005634,GO:0050896,GO:0032502,GO:0044419,GO:0032501,GO:0006351,GO:0005694
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
HD-ZIP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G61890
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Homeobox-leucine zipper protein ATHB-12
OrthoDB(1 item)
187820at33090
Homeobox domain
Pfam(2 items)
 
Homeobox associated leucine zipper
 
Homeobox domain
InterPro(5 items)
 
Homeobox-like_sf
 
Leucine zipper, homeobox-associated
 
Homeobox domain
Gene ontology(10 items)
BP
response to water deprivation
BP
multicellular organism development
MF
sequence-specific DNA binding
MF
DNA-binding transcription factor activity, RNA polymerase II-specific
BP
response to virus
BP
response to abscisic acid
BP
response to osmotic stress
BP
positive regulation of transcription, DNA-templated
MF
DNA-binding transcription factor activity
GO slim(10 items)
BP
regulation of molecular function
BP
regulation of biological process
MF
nucleic acid binding
BP
response to stimulus
BP
developmental process
BP
interspecies interaction between organisms
BP
multicellular organismal process
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.