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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G61830.1
PEP
AT3G61830.1
Position on the Genome Chromosome Chr3
Start Position 22888171
End Position 22891179
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00401046
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Auxin response factor
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Auxin response factor 18
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02362,PF02309,PF06507
Pfam Description Details
InterPro ID
IPR010525,IPR015300,IPR033389,IPR000270,IPR003340
InterPro Description Details
GO ID
GO:0042802,GO:0005634,GO:0003700,GO:0000976,GO:0009734
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0050896,GO:0065009,GO:0006351,GO:0007154,GO:0005515,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ARF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G61830
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Auxin response factor 18
OrthoDB(1 item)
34125at33090
Auxin response factor
Pfam(3 items)
 
B3 DNA binding domain
 
AUX/IAA family
 
Auxin response factor
InterPro(5 items)
 
Auxin response factor
 
DNA-bd_pseudobarrel_sf
 
AUX/IAA domain
 
B3 DNA binding domain
Gene ontology(5 items)
MF
identical protein binding
MF
DNA-binding transcription factor activity
MF
transcription regulatory region sequence-specific DNA binding
BP
auxin-activated signaling pathway
GO slim(8 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
response to stimulus
BP
regulation of molecular function
BP
transcription, DNA-templated
BP
cell communication
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.