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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G57940.1
PEP
AT3G57940.1
Position on the Genome Chromosome Chr3
Start Position 21449560
End Position 21455834
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00115783
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RNA cytidine acetyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF05127,PF08351,PF13725,PF13718
Pfam Description Details
InterPro ID
IPR000182,IPR013562,IPR032672,IPR007807,IPR027992
InterPro Description Details
GO ID
GO:0008080,GO:0005730,GO:0006364,GO:0008033,GO:0005524
GO Description Details
GOslim ID
GO:0016740,GO:0000166,GO:0006396,GO:0043167,GO:0042254,GO:0005730
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
27670at33090
RNA cytidine acetyltransferase
Pfam(4 items)
 
Helicase
 
Domain of unknown function (DUF1726)
 
Possible tRNA binding domain
 
GNAT acetyltransferase 2
InterPro(5 items)
 
tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
 
TmcA/NAT10/Kre33
 
Helicase domain
 
Possible tRNA binding domain
Gene ontology(5 items)
MF
N-acetyltransferase activity
BP
rRNA processing
BP
tRNA processing
GO slim(6 items)
MF
transferase activity
MF
nucleotide binding
BP
RNA processing
BP
ribosome biogenesis

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.