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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G56930.1
PEP
AT3G56930.1
Position on the Genome Chromosome Chr3
Start Position 21073805
End Position 21075873
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00637492
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
S-acyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable protein S-acyltransferase 4
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01529
Pfam Description Details
InterPro ID
IPR001594
InterPro Description Details
GO ID
GO:0019706,GO:0018230,GO:0005886,GO:0030140,GO:0005794,GO:0005783,GO:0006612,GO:0016021,GO:0048767,GO:0035618
GO Description Details
GOslim ID
GO:0005794,GO:0048469,GO:0016020,GO:0032501,GO:0006464,GO:0005575,GO:0005783,GO:0009059,GO:0016740,GO:0051641,GO:0016049,GO:0005773,GO:0042995,GO:0031982,GO:0015031
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G56930
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable protein S-acyltransferase 4
OrthoDB(1 item)
84600at33090
S-acyltransferase
Pfam(1 item)
 
DHHC palmitoyltransferase
InterPro(1 item)
 
Palmitoyltransferase, DHHC domain
Gene ontology(10 items)
MF
protein-cysteine S-palmitoyltransferase activity
BP
peptidyl-L-cysteine S-palmitoylation
CC
plasma membrane
CC
trans-Golgi network transport vesicle
CC
Golgi apparatus
CC
endoplasmic reticulum
BP
protein targeting to membrane
CC
integral component of membrane
BP
root hair elongation
GO slim(15 items)
CC
Golgi apparatus
BP
cell maturation
BP
multicellular organismal process
BP
cellular protein modification process
CC
cellular_component
CC
endoplasmic reticulum
BP
macromolecule biosynthetic process
MF
transferase activity
BP
cellular localization
CC
cell projection
BP
protein transport

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.