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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G56690.1
PEP
AT3G56690.1
Position on the Genome Chromosome Chr3
Start Position 20993869
End Position 20998531
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00385649
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ATPase, AAA-type, conserved site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Calmodulin-interacting protein 111
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF17862,PF00004
Pfam Description Details
InterPro ID
IPR027417,IPR041569,IPR003960,IPR003959,IPR003593
InterPro Description Details
GO ID
GO:0016887,GO:0005516,GO:0009507,GO:0009535,GO:0005737,GO:0005524
GO Description Details
GOslim ID
GO:0009536,GO:0016787,GO:0009579,GO:0016020,GO:0000166,GO:0043167,GO:0005515,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Calmodulin-interacting protein 111
OrthoDB(1 item)
62833at33090
ATPase, AAA-type, conserved site
Pfam(2 items)
 
AAA_lid_3
 
ATPase family associated with various cellular activities (AAA)
InterPro(5 items)
 
P-loop_NTPase
 
ATPase_AAA_CS
 
ATPase, AAA-type, core
 
AAA+ ATPase domain
Gene ontology(6 items)
MF
ATPase activity
MF
calmodulin binding
CC
chloroplast thylakoid membrane
GO slim(8 items)
MF
hydrolase activity
MF
nucleotide binding
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.