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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G56440.1
PEP
AT3G56440.1
Position on the Genome Chromosome Chr3
Start Position 20926874
End Position 20928797
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00389139
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Autophagy-related protein 18d
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR001680,IPR036322,IPR015943
InterPro Description Details
GO ID
GO:0015031,GO:0044804,GO:0000045,GO:0000422,GO:0032266,GO:0005829,GO:0019898,GO:0034497,GO:0006497,GO:0005774,GO:0080025,GO:0034045
GO Description Details
GOslim ID
GO:0006914,GO:0008289,GO:0005773,GO:0007005,GO:0006464,GO:0019787,GO:0007033,GO:0015031,GO:0008233,GO:0008641,GO:0005737,GO:0009059,GO:0022607,GO:0016020,GO:0043167,GO:0051641,GO:0022411
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G56440
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.