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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G55920.1
PEP
AT3G55920.1
Position on the Genome Chromosome Chr3
Start Position 20743529
End Position 20745049
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404344
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidyl-prolyl cis-trans isomerase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Peptidyl-prolyl cis-trans isomerase CYP21-2
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00160
Pfam Description Details
InterPro ID
IPR002130,IPR029000,IPR020892
InterPro Description Details
GO ID
GO:0005794,GO:0005886,GO:0043231,GO:0016018,GO:0006457,GO:0005737,GO:0005797,GO:0005768,GO:0003755,GO:0005802,GO:0005783,GO:0000413
GO Description Details
GOslim ID
GO:0005737,GO:0016853,GO:0043231,GO:0016020,GO:0005783,GO:0005794,GO:0006464,GO:0042277,GO:0005768,GO:0008144,GO:0006457
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G55920
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Peptidyl-prolyl cis-trans isomerase CYP21-2
OrthoDB(1 item)
171735at33090
Peptidyl-prolyl cis-trans isomerase
Pfam(1 item)
 
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
InterPro(3 items)
 
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 
Cyclophilin-like_dom_sf
 
Cyclophilin-type_PPIase_CS
Gene ontology(12 items)
CC
Golgi apparatus
CC
plasma membrane
CC
intracellular membrane-bounded organelle
MF
cyclosporin A binding
BP
protein folding
CC
Golgi medial cisterna
MF
peptidyl-prolyl cis-trans isomerase activity
CC
trans-Golgi network
CC
endoplasmic reticulum
BP
protein peptidyl-prolyl isomerization
GO slim(11 items)
MF
isomerase activity
CC
intracellular membrane-bounded organelle
CC
endoplasmic reticulum
CC
Golgi apparatus
BP
cellular protein modification process
MF
peptide binding
BP
protein folding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.