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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G54030.1
PEP
AT3G54030.1
Position on the Genome Chromosome Chr3
Start Position 20011162
End Position 20013490
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00564264
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Serine/threonine-protein kinase BSK6
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF07714
Pfam Description Details
InterPro ID
IPR011990,IPR001245,IPR000719,IPR011009
InterPro Description Details
GO ID
GO:0004674,GO:0005524,GO:0009742,GO:0005886
GO Description Details
GOslim ID
GO:0000166,GO:0016020,GO:0006464,GO:0043167,GO:0006793,GO:0016740,GO:0050896,GO:0050789,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Serine/threonine-protein kinase BSK6
OrthoDB(1 item)
69480at33090
Protein kinase domain
Pfam(1 item)
 
Protein tyrosine kinase
InterPro(4 items)
 
TPR-like_helical_dom_sf
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
 
Protein kinase domain
 
Kinase-like_dom_sf
Gene ontology(4 items)
MF
protein serine/threonine kinase activity
BP
brassinosteroid mediated signaling pathway
CC
plasma membrane
GO slim(9 items)
MF
nucleotide binding
BP
cellular protein modification process
BP
phosphorus metabolic process
MF
transferase activity
BP
response to stimulus
BP
regulation of biological process
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.