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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G53720.1
PEP
AT3G53720.1
Position on the Genome Chromosome Chr3
Start Position 19905826
End Position 19910027
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00391822
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cation/H+ exchanger
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cation/H(+) antiporter 20
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00999
Pfam Description Details
InterPro ID
IPR038770,IPR006153
InterPro Description Details
GO ID
GO:0030007,GO:0016021,GO:0006813,GO:0030104,GO:0005783,GO:0012505,GO:0015299,GO:0015672,GO:0006623,GO:0006885
GO Description Details
GOslim ID
GO:0065008,GO:0015031,GO:0006811,GO:0005215,GO:0016020,GO:0005773,GO:1902600,GO:0051641,GO:0005575,GO:0005783
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Cation/H(+) antiporter 20
OrthoDB(1 item)
52998at33090
Cation/H+ exchanger
Pfam(1 item)
 
Sodium/hydrogen exchanger family
InterPro(2 items)
 
Na+/solute_symporter_sf
 
Cation/H+ exchanger
Gene ontology(10 items)
BP
cellular potassium ion homeostasis
CC
integral component of membrane
BP
potassium ion transport
BP
water homeostasis
CC
endoplasmic reticulum
CC
endomembrane system
MF
solute:proton antiporter activity
BP
inorganic cation transmembrane transport
BP
protein targeting to vacuole
BP
regulation of pH
GO slim(10 items)
BP
regulation of biological quality
BP
protein transport
BP
ion transport
MF
transporter activity
BP
proton transmembrane transport
BP
cellular localization
CC
cellular_component
CC
endoplasmic reticulum

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.