Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G52940.1
PEP
AT3G52940.1
Position on the Genome Chromosome Chr3
Start Position 19630369
End Position 19633112
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00337275
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ergosterol biosynthesis ERG4/ERG24
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Delta(14)-sterol reductase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01222
Pfam Description Details
InterPro ID
IPR001171,IPR018083
InterPro Description Details
GO ID
GO:0050661,GO:0050613,GO:0016627,GO:0016126,GO:0030176
GO Description Details
GOslim ID
GO:0005783,GO:0016491,GO:0006629,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G52940
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Delta(14)-sterol reductase
OrthoDB(1 item)
114812at33090
Ergosterol biosynthesis ERG4/ERG24
Pfam(1 item)
 
Ergosterol biosynthesis ERG4/ERG24 family
InterPro(2 items)
 
Ergosterol biosynthesis ERG4/ERG24
 
Sterol_reductase_CS
Gene ontology(5 items)
MF
delta14-sterol reductase activity
MF
oxidoreductase activity, acting on the CH-CH group of donors
BP
sterol biosynthetic process
CC
integral component of endoplasmic reticulum membrane
GO slim(4 items)
CC
endoplasmic reticulum
MF
oxidoreductase activity
BP
lipid metabolic process
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.