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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G51270.1
PEP
AT3G51270.1
Position on the Genome Chromosome Chr3
Start Position 19033851
End Position 19036772
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00134155
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Winged helix-like DNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Non-specific serine/threonine protein kinase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF09202
Pfam Description Details
InterPro ID
IPR030484,IPR036390,IPR036388,IPR015285,IPR000687,IPR011009
InterPro Description Details
GO ID
GO:0005524,GO:0004674,GO:0005634,GO:0030688,GO:0005829,GO:0030490,GO:0004672
GO Description Details
GOslim ID
GO:0016740,GO:0006464,GO:0043167,GO:0000166,GO:0005737,GO:0042254,GO:0030684,GO:0005634,GO:0006793,GO:0006396
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Non-specific serine/threonine protein kinase
OrthoDB(1 item)
161548at33090
Winged helix-like DNA-binding domain superfamily
Pfam(1 item)
 
Rio2, N-terminal
InterPro(6 items)
 
WH-like_DNA-bd_sf
 
RIO2 kinase winged helix domain, N-terminal
 
Kinase-like_dom_sf
Gene ontology(7 items)
MF
protein serine/threonine kinase activity
CC
preribosome, small subunit precursor
BP
maturation of SSU-rRNA
MF
protein kinase activity
GO slim(10 items)
MF
transferase activity
BP
cellular protein modification process
MF
nucleotide binding
BP
ribosome biogenesis
BP
phosphorus metabolic process
BP
RNA processing

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.