Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G51120.1
PEP
AT3G51120.1
Position on the Genome Chromosome Chr3
Start Position 18986026
End Position 18991886
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00518218
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SWIB/MDM2 domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Zinc finger CCCH domain-containing protein 44
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02213,PF02201,PF00642,PF03126
Pfam Description Details
InterPro ID
IPR003121,IPR036885,IPR036128,IPR011011,IPR019835,IPR035445,IPR000571,IPR004343,IPR013083,IPR019787,IPR036855,IPR003169,IPR001965,IPR019786
InterPro Description Details
GO ID
GO:0003677,GO:0046872
GO Description Details
GOslim ID
GO:0043167,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
C3H family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.