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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G49600.1
PEP
AT3G49600.1
Position on the Genome Chromosome Chr3
Start Position 18380942
End Position 18386662
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00153162
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ubiquitinyl hydrolase 1
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00443
Pfam Description Details
InterPro ID
IPR000626,IPR035927,IPR006615,IPR028889,IPR029071,IPR001394,IPR033841,IPR018200,IPR038765
InterPro Description Details
GO ID
GO:0006511,GO:0016579,GO:0004843,GO:0008234,GO:0005634
GO Description Details
GOslim ID
GO:0008233,GO:0009057,GO:0006508,GO:0006464,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.