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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G48110.1
PEP
AT3G48110.1
Position on the Genome Chromosome Chr3
Start Position 17763111
End Position 17770964
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00122379
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycine-tRNA ligase, alpha subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Glycine--tRNA ligase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02091,PF02092
Pfam Description Details
InterPro ID
IPR015944,IPR002310,IPR006194
InterPro Description Details
GO ID
GO:0004820,GO:0006426,GO:0005737,GO:0005524
GO Description Details
GOslim ID
GO:0016070,GO:0000166,GO:0016874,GO:0005737,GO:0006520,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Glycine--tRNA ligase
OrthoDB(1 item)
21751at33090
Glycine-tRNA ligase, alpha subunit
Pfam(2 items)
 
Glycyl-tRNA synthetase alpha subunit
 
Glycyl-tRNA synthetase beta subunit
InterPro(3 items)
 
Glycine-tRNA ligase, beta subunit
 
Glycine-tRNA ligase, alpha subunit
 
Gly-tRNA-synth_heterodimer
Gene ontology(4 items)
MF
glycine-tRNA ligase activity
BP
glycyl-tRNA aminoacylation
GO slim(6 items)
BP
RNA metabolic process
MF
nucleotide binding
MF
ligase activity
BP
cellular amino acid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.