Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G45420.1
PEP
AT3G45420.1
Position on the Genome Chromosome Chr3
Start Position 16657263
End Position 16659266
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00626803
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Putative L-type lectin-domain containing receptor kinase I.4
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00069,PF00139
Pfam Description Details
InterPro ID
IPR001220,IPR000719,IPR008271,IPR013320,IPR017441,IPR011009
InterPro Description Details
GO ID
GO:0006952,GO:0042742,GO:0005886,GO:0030246,GO:0016021,GO:0004675,GO:0005739,GO:0002229,GO:0005524
GO Description Details
GOslim ID
GO:0050896,GO:0030246,GO:0016020,GO:0016740,GO:0050789,GO:0044419,GO:0005739,GO:0006793,GO:0007154,GO:0043167,GO:0006464,GO:0038023,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Putative L-type lectin-domain containing receptor kinase I.4
OrthoDB(1 item)
39478at33090
Protein kinase domain
Pfam(2 items)
 
Protein kinase domain
 
Legume lectin domain
InterPro(6 items)
 
Legume lectin domain
 
Protein kinase domain
 
Ser/Thr_kinase_AS
 
ConA-like_dom_sf
 
Protein_kinase_ATP_BS
 
Kinase-like_dom_sf
Gene ontology(9 items)
BP
defense response
BP
defense response to bacterium
CC
plasma membrane
MF
carbohydrate binding
CC
integral component of membrane
MF
transmembrane receptor protein serine/threonine kinase activity
CC
mitochondrion
BP
defense response to oomycetes
GO slim(13 items)
BP
response to stimulus
MF
carbohydrate binding
MF
transferase activity
BP
regulation of biological process
BP
interspecies interaction between organisms
CC
mitochondrion
BP
phosphorus metabolic process
BP
cell communication
BP
cellular protein modification process
MF
signaling receptor activity
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.