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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G45300.1
PEP
AT3G45300.1
Position on the Genome Chromosome Chr3
Start Position 16621659
End Position 16624848
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00162527
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Acyl-CoA dehydrogenase/oxidase, N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
IVDH
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02770,PF00441,PF02771
Pfam Description Details
InterPro ID
IPR006089,IPR037069,IPR036250,IPR006091,IPR009100,IPR034183,IPR009075,IPR013786
InterPro Description Details
GO ID
GO:0050660,GO:0003995
GO Description Details
GOslim ID
GO:0016491,GO:0000166,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
139684at33090
Acyl-CoA dehydrogenase/oxidase, N-terminal
Pfam(3 items)
 
Acyl-CoA dehydrogenase, middle domain
 
Acyl-CoA dehydrogenase, C-terminal domain
 
Acyl-CoA dehydrogenase, N-terminal domain
InterPro(8 items)
 
Acyl-CoA_DH_CS
 
AcylCoA_DH/ox_N_sf
 
AcylCo_DH-like_C
 
Acyl-CoA oxidase/dehydrogenase, central domain
 
AcylCoA_DH/oxidase_NM_dom
 
Acyl-CoA dehydrogenase/oxidase C-terminal
 
Acyl-CoA dehydrogenase/oxidase, N-terminal
Gene ontology(2 items)
MF
flavin adenine dinucleotide binding
MF
acyl-CoA dehydrogenase activity
GO slim(3 items)
MF
oxidoreductase activity
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.