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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G44400.1
PEP
AT3G44400.1
Position on the Genome Chromosome Chr3
Start Position 16046331
End Position 16049668
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00068857
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Toll/interleukin-1 receptor homology (TIR) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00931,PF01582,PF07725
Pfam Description Details
InterPro ID
IPR011713,IPR003593,IPR002182,IPR000157,IPR027417,IPR035897,IPR036390,IPR032675
InterPro Description Details
GO ID
GO:0050135,GO:0007165,GO:0006952,GO:0061809,GO:0043531
GO Description Details
GOslim ID
GO:0050896,GO:0009975,GO:0000166,GO:0016787,GO:0050789,GO:0007154,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
OrthoDB(1 item)
9795at33090
Toll/interleukin-1 receptor homology (TIR) domain
Pfam(3 items)
 
NB-ARC domain
 
TIR domain
 
Leucine Rich Repeat
InterPro(8 items)
 
Leucine-rich repeat 3
 
AAA+ ATPase domain
 
Toll/interleukin-1 receptor homology (TIR) domain
 
P-loop_NTPase
 
Toll_tir_struct_dom_sf
Gene ontology(5 items)
MF
NAD(P)+ nucleosidase activity
BP
signal transduction
BP
defense response
MF
NAD+ nucleotidase, cyclic ADP-ribose generating
GO slim(7 items)
BP
response to stimulus
MF
cyclase activity
MF
nucleotide binding
MF
hydrolase activity
BP
regulation of biological process
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.