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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G43740.2
PEP
AT3G43740.2
Position on the Genome Chromosome Chr3
Start Position 15644127
End Position 15645446
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01207398
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Leucine-rich repeat protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF08263,PF13855
Pfam Description Details
InterPro ID
IPR013210,IPR001611,IPR032675
InterPro Description Details
GO ID
GO:0006952
GO Description Details
GOslim ID
GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Leucine-rich repeat protein 2
OrthoDB(1 item)
158466at33090
Leucine-rich repeat
Pfam(2 items)
 
Leucine rich repeat N-terminal domain
 
Leucine rich repeat
InterPro(3 items)
 
Leucine-rich repeat-containing N-terminal, plant-type
 
Leucine-rich repeat
Gene ontology(1 item)
BP
defense response
GO slim(1 item)
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.