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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G42790.1
PEP
AT3G42790.1
Position on the Genome Chromosome Chr3
Start Position 14878128
End Position 14879618
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00397368
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, PHD-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
PHD finger protein ALFIN-LIKE 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00628,PF12165
Pfam Description Details
InterPro ID
IPR019786,IPR021998,IPR013083,IPR019787,IPR011011,IPR001965,IPR044104
InterPro Description Details
GO ID
GO:0046872,GO:0006355,GO:0000976,GO:0042393,GO:0003712,GO:0006325,GO:0005634
GO Description Details
GOslim ID
GO:0003676,GO:0016070,GO:0006351,GO:0065009,GO:0051276,GO:0050789,GO:0043167,GO:0009059,GO:0005515,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.