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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G28580.1
PEP
AT3G28580.1
Position on the Genome Chromosome Chr3
Start Position 10715736
End Position 10717238
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00205649
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AAA-type ATPase, N-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
AAA domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14363,PF00004
Pfam Description Details
InterPro ID
IPR003959,IPR025753,IPR027417,IPR003593
InterPro Description Details
GO ID
GO:0005524,GO:0016021,GO:0016887
GO Description Details
GOslim ID
GO:0000166,GO:0016020,GO:0043167,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
AAA domain-containing protein
OrthoDB(1 item)
74414at33090
AAA-type ATPase, N-terminal domain
Pfam(2 items)
 
Domain associated at C-terminal with AAA
 
ATPase family associated with various cellular activities (AAA)
InterPro(4 items)
 
ATPase, AAA-type, core
 
AAA-type ATPase, N-terminal domain
 
P-loop_NTPase
 
AAA+ ATPase domain
Gene ontology(3 items)
CC
integral component of membrane
MF
ATPase activity
GO slim(4 items)
MF
nucleotide binding
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.