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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G25900.1
PEP
AT3G25900.1
Position on the Genome Chromosome Chr3
Start Position 9480964
End Position 9482684
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00308762
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homocysteine-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Homocysteine S-methyltransferase 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02574
Pfam Description Details
InterPro ID
IPR017226,IPR003726,IPR036589
InterPro Description Details
GO ID
GO:0047150,GO:0008270,GO:0009086,GO:0032259,GO:0008898,GO:0033528
GO Description Details
GOslim ID
GO:0006807,GO:0006790,GO:0043167,GO:0016740,GO:0006520,GO:0008152
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G25900
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Homocysteine S-methyltransferase 1
OrthoDB(1 item)
130215at33090
Homocysteine-binding domain
Pfam(1 item)
 
Homocysteine S-methyltransferase
InterPro(3 items)
 
Betaine-hCys_S-MeTrfase_BHMT
 
Homocysteine-binding domain
Gene ontology(6 items)
MF
betaine-homocysteine S-methyltransferase activity
MF
zinc ion binding
BP
methionine biosynthetic process
MF
S-adenosylmethionine-homocysteine S-methyltransferase activity
BP
S-methylmethionine cycle
GO slim(6 items)
BP
nitrogen compound metabolic process
BP
sulfur compound metabolic process
MF
transferase activity
BP
cellular amino acid metabolic process
BP
metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.