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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G25610.1
PEP
AT3G25610.1
Position on the Genome Chromosome Chr3
Start Position 9308942
End Position 9313353
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00312414
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phospholipid-transporting ATPase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF16209,PF16212
Pfam Description Details
InterPro ID
IPR023214,IPR006539,IPR001757,IPR008250,IPR018303,IPR032631,IPR032630,IPR023299,IPR023298,IPR036412
InterPro Description Details
GO ID
GO:0015914,GO:0016021,GO:0005524,GO:0000287,GO:0140326
GO Description Details
GOslim ID
GO:0043167,GO:0016787,GO:0005215,GO:0061024,GO:0006811,GO:0016020,GO:0006869,GO:0000166,GO:0065008
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phospholipid-transporting ATPase
OrthoDB(1 item)
3509at33090
P-type ATPase
Pfam(2 items)
 
Phospholipid-translocating ATPase N-terminal
 
Phospholipid-translocating P-type ATPase C-terminal
InterPro(10 items)
 
P-type_ATPase_IV
 
ATPase_P-typ_transduc_dom_A_sf
 
ATPase_P-typ_P_site
 
P-type ATPase, N-terminal
 
P-type ATPase, C-terminal
 
ATPase_P-typ_cyto_dom_N
 
ATPase_P-typ_TM_dom_sf
Gene ontology(5 items)
BP
phospholipid transport
CC
integral component of membrane
MF
magnesium ion binding
MF
ATPase-coupled intramembrane lipid transporter activity
GO slim(9 items)
MF
hydrolase activity
MF
transporter activity
BP
membrane organization
BP
ion transport
BP
lipid transport
MF
nucleotide binding
BP
regulation of biological quality

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.