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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G24650.1
PEP
AT3G24650.1
Position on the Genome Chromosome Chr3
Start Position 8997911
End Position 9000780
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00684543
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
B3 DNA binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
SIS10
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02362
Pfam Description Details
InterPro ID
IPR015300,IPR003340
InterPro Description Details
GO ID
GO:0005634,GO:0003677
GO Description Details
GOslim ID
GO:0005634,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
B3 family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
72660at33090
B3 DNA binding domain
Pfam(1 item)
 
B3 DNA binding domain
InterPro(2 items)
 
DNA-bd_pseudobarrel_sf
 
B3 DNA binding domain
Gene ontology(2 items)
GO slim(2 items)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.