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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G22830.1
PEP
AT3G22830.1
Position on the Genome Chromosome Chr3
Start Position 8078981
End Position 8080895
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319582
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Heat shock factor (HSF)-type, DNA-binding
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Heat stress transcription factor A-6b
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00447
Pfam Description Details
InterPro ID
IPR036388,IPR027725,IPR036390,IPR000232
InterPro Description Details
GO ID
GO:0000978,GO:0005737,GO:0003700,GO:0005634,GO:0006357,GO:0034605
GO Description Details
GOslim ID
GO:0005634,GO:0003676,GO:0005737,GO:0006351,GO:0065009,GO:0050896,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
HSF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G22830
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Heat stress transcription factor A-6b
OrthoDB(1 item)
206694at33090
Heat shock factor (HSF)-type, DNA-binding
Pfam(1 item)
 
HSF-type DNA-binding
InterPro(4 items)
 
WH-like_DNA-bd_sf
 
Heat shock factor (HSF)-type, DNA-binding
Gene ontology(6 items)
MF
RNA polymerase II cis-regulatory region sequence-specific DNA binding
MF
DNA-binding transcription factor activity
BP
regulation of transcription by RNA polymerase II
BP
cellular response to heat
GO slim(7 items)
MF
nucleic acid binding
BP
transcription, DNA-templated
BP
regulation of molecular function
BP
response to stimulus
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.