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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G21190.1
PEP
AT3G21190.1
Position on the Genome Chromosome Chr3
Start Position 7432579
End Position 7434543
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00463759
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
GDP-fucose protein O-fucosyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein MANNAN SYNTHESIS-RELATED 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF10250
Pfam Description Details
InterPro ID
IPR024709,IPR019378
InterPro Description Details
GO ID
GO:0016021,GO:0052325,GO:0006004,GO:0097502,GO:0000139,GO:0005797,GO:0005802,GO:0005768,GO:0005794,GO:0051753,GO:0010412
GO Description Details
GOslim ID
GO:0005975,GO:0005794,GO:0016020,GO:0044085,GO:0005976,GO:0008152,GO:0071555,GO:0005768,GO:0009059,GO:0016740
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Protein MANNAN SYNTHESIS-RELATED 1
OrthoDB(1 item)
90596at33090
GDP-fucose protein O-fucosyltransferase
Pfam(1 item)
 
GDP-fucose protein O-fucosyltransferase
InterPro(2 items)
 
FucosylTrfase_pln
 
GDP-fucose protein O-fucosyltransferase
Gene ontology(11 items)
CC
integral component of membrane
BP
cell wall pectin biosynthetic process
BP
fucose metabolic process
BP
mannosylation
CC
Golgi membrane
CC
Golgi medial cisterna
CC
trans-Golgi network
CC
Golgi apparatus
MF
mannan synthase activity
BP
mannan metabolic process
GO slim(10 items)
BP
carbohydrate metabolic process
CC
Golgi apparatus
BP
cellular component biogenesis
BP
polysaccharide metabolic process
BP
metabolic process
BP
cell wall organization
BP
macromolecule biosynthetic process
MF
transferase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.