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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G20000.1
PEP
AT3G20000.1
Position on the Genome Chromosome Chr3
Start Position 6967685
End Position 6970247
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00560986
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Tom40
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Mitochondrial import receptor subunit TOM40-1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01459
Pfam Description Details
InterPro ID
IPR027246,IPR023614,IPR037930
InterPro Description Details
GO ID
GO:0006811,GO:0015450,GO:0006626,GO:0005742,GO:0030150,GO:0005774,GO:0005829,GO:0005743,GO:0005739,GO:0046930,GO:0005741,GO:0008320,GO:0015288
GO Description Details
GOslim ID
GO:0015031,GO:0005215,GO:0005739,GO:0016020,GO:0005575,GO:0006810,GO:0032991,GO:0051641,GO:0007005,GO:0005773,GO:0006811,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G20000
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Mitochondrial import receptor subunit TOM40-1
OrthoDB(1 item)
Pfam(1 item)
 
Eukaryotic porin
InterPro(3 items)
 
Eukaryotic porin/Tom40
Gene ontology(13 items)
BP
ion transport
MF
P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BP
protein targeting to mitochondrion
CC
mitochondrial outer membrane translocase complex
BP
protein import into mitochondrial matrix
CC
vacuolar membrane
CC
mitochondrial inner membrane
CC
mitochondrion
CC
mitochondrial outer membrane
MF
protein transmembrane transporter activity
MF
porin activity
GO slim(12 items)
BP
protein transport
MF
transporter activity
CC
mitochondrion
CC
cellular_component
CC
protein-containing complex
BP
cellular localization
BP
mitochondrion organization
BP
ion transport

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.