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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G19720.1
PEP
AT3G19720.1
Position on the Genome Chromosome Chr3
Start Position 6850591
End Position 6855389
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00409859
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Dynamin superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Dynamin-like protein ARC5
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00350
Pfam Description Details
InterPro ID
IPR022812,IPR030381,IPR001401,IPR027417
InterPro Description Details
GO ID
GO:0003924,GO:0005737,GO:0000266,GO:0005777,GO:0009707,GO:0007623,GO:0042802,GO:0005525,GO:0016020,GO:0016559,GO:0008017,GO:0010020,GO:0009507,GO:0048285
GO Description Details
GOslim ID
GO:0009536,GO:0009657,GO:0016020,GO:0016787,GO:0042579,GO:0005515,GO:0007005,GO:0043167,GO:0001882,GO:0048285,GO:0007031,GO:0005737,GO:0000166,GO:0048511
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Dynamin-like protein ARC5
OrthoDB(1 item)
36284at33090
Dynamin superfamily
Pfam(1 item)
 
Dynamin family
InterPro(4 items)
 
Dynamin superfamily
 
G_DYNAMIN_dom
 
Dynamin_GTPase
 
P-loop_NTPase
Gene ontology(14 items)
MF
GTPase activity
BP
mitochondrial fission
CC
chloroplast outer membrane
BP
circadian rhythm
MF
identical protein binding
BP
peroxisome fission
MF
microtubule binding
BP
chloroplast fission
BP
organelle fission
GO slim(14 items)
BP
plastid organization
MF
hydrolase activity
MF
protein binding
BP
mitochondrion organization
MF
nucleoside binding
BP
organelle fission
BP
peroxisome organization
MF
nucleotide binding
BP
rhythmic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.