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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G19010.1
PEP
AT3G19010.1
Position on the Genome Chromosome Chr3
Start Position 6556306
End Position 6557862
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00097235
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Fe2OG dioxygenase domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03171,PF14226
Pfam Description Details
InterPro ID
IPR026992,IPR005123,IPR027443
InterPro Description Details
GO ID
GO:0046872,GO:0016491
GO Description Details
GOslim ID
GO:0016491,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Fe2OG dioxygenase domain-containing protein
OrthoDB(1 item)
128068at33090
Oxoglutarate/iron-dependent dioxygenase
Pfam(2 items)
 
2OG-Fe(II) oxygenase superfamily
 
non-haem dioxygenase in morphine synthesis N-terminal
InterPro(3 items)
 
Non-haem dioxygenase N-terminal domain
 
Oxoglutarate/iron-dependent dioxygenase
Gene ontology(2 items)
MF
metal ion binding
MF
oxidoreductase activity
GO slim(2 items)
MF
oxidoreductase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.