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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G16980.1
PEP
AT3G16980.1
Position on the Genome Chromosome Chr3
Start Position 5794526
End Position 5795699
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00185228
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DNA-directed RNA polymerase subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
DNA-directed RNA polymerases II, IV and V subunit 9A
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02150,PF01096
Pfam Description Details
InterPro ID
IPR001222,IPR019761,IPR012164,IPR001529,IPR034012
InterPro Description Details
GO ID
GO:0005665,GO:0006379,GO:0006367,GO:0001193,GO:0005730,GO:0008270,GO:0003899,GO:0003676,GO:0000419,GO:0006283
GO Description Details
GOslim ID
GO:0016070,GO:0003676,GO:0005634,GO:0030880,GO:0006351,GO:0006354,GO:0005730,GO:0016740,GO:0043167,GO:0016591,GO:0009059,GO:0006281
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G16980
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.