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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G16240.1
PEP
AT3G16240.1
Position on the Genome Chromosome Chr3
Start Position 5505534
End Position 5506788
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00636927
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Major intrinsic protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Aquaporin TIP2-1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00230
Pfam Description Details
InterPro ID
IPR023271,IPR034294,IPR000425,IPR022357
InterPro Description Details
GO ID
GO:0000326,GO:0005773,GO:0042802,GO:0005794,GO:0009705,GO:0006833,GO:0009505,GO:0005886,GO:0015200,GO:0042807,GO:0016021,GO:0009941,GO:0015250,GO:0005774,GO:0009506,GO:0005618
GO Description Details
GOslim ID
GO:0005773,GO:0005618,GO:0005794,GO:0005215,GO:0016020,GO:0015837,GO:0042044,GO:0005515,GO:0006811,GO:0055044,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G16240
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.