Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G15360.1
PEP
AT3G15360.1
Position on the Genome Chromosome Chr3
Start Position 5188448
End Position 5189457
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00582205
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thioredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thioredoxin M4, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00085
Pfam Description Details
InterPro ID
IPR036249,IPR013766,IPR005746,IPR017937
InterPro Description Details
GO ID
GO:0005618,GO:0009507,GO:0009941,GO:0009570,GO:0019904,GO:0045454,GO:0009535,GO:0006109,GO:0006662,GO:0043086,GO:0005829,GO:0005737,GO:0015035,GO:0043085,GO:0004857,GO:0047134,GO:0016671,GO:0008047,GO:0009579
GO Description Details
GOslim ID
GO:0009536,GO:0005975,GO:0005737,GO:0030234,GO:0050789,GO:0005515,GO:0009579,GO:0003824,GO:0016491,GO:0065009,GO:0065008,GO:0006662,GO:0016020,GO:0005618
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G15360
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Thioredoxin M4, chloroplastic
OrthoDB(1 item)
215951at33090
Thioredoxin
Pfam(1 item)
 
Thioredoxin
InterPro(4 items)
 
Thioredoxin-like_sf
 
Thioredoxin domain
 
Thioredoxin_CS
Gene ontology(19 items)
CC
chloroplast envelope
CC
chloroplast stroma
MF
protein domain specific binding
BP
cell redox homeostasis
CC
chloroplast thylakoid membrane
BP
regulation of carbohydrate metabolic process
BP
glycerol ether metabolic process
BP
negative regulation of catalytic activity
MF
protein disulfide oxidoreductase activity
BP
positive regulation of catalytic activity
MF
enzyme inhibitor activity
MF
protein-disulfide reductase activity
MF
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
MF
enzyme activator activity
GO slim(14 items)
BP
carbohydrate metabolic process
MF
enzyme regulator activity
BP
regulation of biological process
MF
protein binding
MF
catalytic activity
MF
oxidoreductase activity
BP
regulation of molecular function
BP
regulation of biological quality
BP
glycerol ether metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.