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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G15210.1
PEP
AT3G15210.1
Position on the Genome Chromosome Chr3
Start Position 5121472
End Position 5122140
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404154
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AP2/ERF domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ethylene-responsive transcription factor 4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00847
Pfam Description Details
InterPro ID
IPR001471,IPR016177,IPR036955
InterPro Description Details
GO ID
GO:0071456,GO:0000976,GO:0009737,GO:0009873,GO:0045892,GO:0010200,GO:0016604,GO:0010105,GO:0009864,GO:0009723,GO:0003700,GO:0005634
GO Description Details
GOslim ID
GO:0050896,GO:0005575,GO:0005634,GO:0007154,GO:0050789,GO:0044419,GO:0006351,GO:0003676,GO:0065009,GO:0002376
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ERF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G15210
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ethylene-responsive transcription factor 4
OrthoDB(1 item)
217418at33090
AP2/ERF domain
Pfam(1 item)
 
AP2 domain
InterPro(3 items)
 
AP2/ERF domain
 
DNA-bd_dom_sf
 
AP2/ERF_dom_sf
Gene ontology(12 items)
BP
cellular response to hypoxia
MF
transcription regulatory region sequence-specific DNA binding
BP
response to abscisic acid
BP
ethylene-activated signaling pathway
BP
negative regulation of transcription, DNA-templated
BP
response to chitin
BP
negative regulation of ethylene-activated signaling pathway
BP
induced systemic resistance, jasmonic acid mediated signaling pathway
BP
response to ethylene
MF
DNA-binding transcription factor activity
GO slim(10 items)
BP
response to stimulus
CC
cellular_component
BP
cell communication
BP
regulation of biological process
BP
interspecies interaction between organisms
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
regulation of molecular function
BP
immune system process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.