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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G10730.1
PEP
AT3G10730.1
Position on the Genome Chromosome Chr3
Start Position 3358556
End Position 3360522
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00207740
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SUN domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
SUN domain-containing protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF07738
Pfam Description Details
InterPro ID
IPR012919,IPR008979
InterPro Description Details
GO ID
GO:0043621,GO:0016021,GO:0005783,GO:0005789,GO:0090435,GO:0009524,GO:0051260,GO:0006997,GO:0005637,GO:0005819,GO:0043495,GO:0006998,GO:0005635,GO:0051291,GO:0070197
GO Description Details
GOslim ID
GO:0016020,GO:0051640,GO:0005773,GO:0005737,GO:0065003,GO:0051234,GO:0000003,GO:0005515,GO:0007049,GO:0060090,GO:0005856,GO:0006997,GO:0061024,GO:0005783,GO:0000280,GO:0007059,GO:0005634,GO:0051641,GO:0051276
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G10730
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
SUN domain-containing protein 2
OrthoDB(1 item)
228048at33090
SUN domain
Pfam(1 item)
 
Sad1 / UNC-like C-terminal
InterPro(2 items)
 
Galactose-bd-like_sf
Gene ontology(15 items)
MF
protein self-association
CC
integral component of membrane
CC
endoplasmic reticulum
CC
endoplasmic reticulum membrane
BP
protein localization to nuclear envelope
BP
protein homooligomerization
BP
nucleus organization
CC
nuclear inner membrane
MF
protein-membrane adaptor activity
BP
nuclear envelope organization
CC
nuclear envelope
BP
protein heterooligomerization
BP
meiotic attachment of telomere to nuclear envelope
GO slim(19 items)
BP
organelle localization
BP
protein-containing complex assembly
BP
establishment of localization
MF
protein binding
MF
molecular adaptor activity
BP
nucleus organization
BP
membrane organization
CC
endoplasmic reticulum
BP
nuclear division
BP
chromosome segregation
BP
cellular localization
BP
chromosome organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.