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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G10500.1
PEP
AT3G10500.1
Position on the Genome Chromosome Chr3
Start Position 3271718
End Position 3273887
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00249364
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
NAC domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
NAC domain-containing protein 53
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02365
Pfam Description Details
InterPro ID
IPR003441,IPR036093
InterPro Description Details
GO ID
GO:0003677,GO:0005789,GO:0045893,GO:0010150,GO:0009819,GO:0016021,GO:0003700,GO:0005737,GO:0005634,GO:2000377
GO Description Details
GOslim ID
GO:0032502,GO:0003676,GO:0065009,GO:0050789,GO:0008152,GO:0050896,GO:0016020,GO:0005634,GO:0005737,GO:0006351,GO:0005783,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
NAC family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
NAC domain-containing protein 53
OrthoDB(1 item)
48070at33090
NAC domain
Pfam(1 item)
 
No apical meristem (NAM) protein
InterPro(2 items)
Gene ontology(10 items)
CC
endoplasmic reticulum membrane
BP
positive regulation of transcription, DNA-templated
BP
leaf senescence
BP
drought recovery
CC
integral component of membrane
MF
DNA-binding transcription factor activity
BP
regulation of reactive oxygen species metabolic process
GO slim(12 items)
BP
developmental process
MF
nucleic acid binding
BP
regulation of molecular function
BP
regulation of biological process
BP
metabolic process
BP
response to stimulus
BP
transcription, DNA-templated
CC
endoplasmic reticulum
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.