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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G09150.2
PEP
AT3G09150.2
Position on the Genome Chromosome Chr3
Start Position 2803665
End Position 2805333
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00084310
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ferredoxin-dependent bilin reductase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phytochromobilinferredoxin oxidoreductase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF05996
Pfam Description Details
InterPro ID
IPR009249
InterPro Description Details
GO ID
GO:0010024,GO:0009507,GO:0050897,GO:0010019,GO:0050619
GO Description Details
GOslim ID
GO:0007154,GO:0016491,GO:0046483,GO:0006807,GO:0050896,GO:0043167,GO:0050789,GO:0006725,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G09150
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phytochromobilinferredoxin oxidoreductase, chloroplastic
OrthoDB(1 item)
137363at33090
Ferredoxin-dependent bilin reductase
Pfam(1 item)
 
Ferredoxin-dependent bilin reductase
InterPro(1 item)
 
Ferredoxin-dependent bilin reductase
Gene ontology(5 items)
BP
phytochromobilin biosynthetic process
MF
cobalt ion binding
BP
chloroplast-nucleus signaling pathway
MF
phytochromobilin:ferredoxin oxidoreductase activity
GO slim(9 items)
BP
cell communication
MF
oxidoreductase activity
BP
heterocycle metabolic process
BP
nitrogen compound metabolic process
BP
response to stimulus
BP
regulation of biological process
BP
cellular aromatic compound metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.