Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G07990.1
PEP
AT3G07990.1
Position on the Genome Chromosome Chr3
Start Position 2552544
End Position 2554644
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404715
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Carboxypeptidase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Serine carboxypeptidase-like 27
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00450
Pfam Description Details
InterPro ID
IPR033124,IPR018202,IPR001563,IPR029058
InterPro Description Details
GO ID
GO:0004185,GO:0005773,GO:0005576
GO Description Details
GOslim ID
GO:0005576,GO:0008233,GO:0005773
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G07990
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Serine carboxypeptidase-like 27
OrthoDB(1 item)
125711at33090
Carboxypeptidase
Pfam(1 item)
 
Serine carboxypeptidase
InterPro(4 items)
 
Ser_caboxypep_his_AS
 
Ser_caboxypep_ser_AS
 
Peptidase S10, serine carboxypeptidase
Gene ontology(3 items)
MF
serine-type carboxypeptidase activity
CC
extracellular region
GO slim(3 items)
CC
extracellular region
MF
peptidase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.