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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G07780.2
PEP
AT3G07780.2
Position on the Genome Chromosome Chr3
Start Position 2484986
End Position 2486876
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00746016
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein OBERON
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Protein OBERON
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07227,PF16312
Pfam Description Details
InterPro ID
IPR032881,IPR032535,IPR004082,IPR001965
InterPro Description Details
GO ID
GO:0005634,GO:0046872
GO Description Details
GOslim ID
GO:0043167,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein OBERON
OrthoDB(1 item)
47547at33090
Protein OBERON
Pfam(2 items)
 
PHD - plant homeodomain finger protein
 
Coiled-coil region of Oberon
InterPro(4 items)
 
Oberon, PHD finger domain
 
Oberon, coiled-coil region
Gene ontology(2 items)
MF
metal ion binding
GO slim(2 items)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.