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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G06730.1
PEP
AT3G06730.1
Position on the Genome Chromosome Chr3
Start Position 2124276
End Position 2125845
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00403347
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thioredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thioredoxin-like protein CITRX, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00085
Pfam Description Details
InterPro ID
IPR013766,IPR036249
InterPro Description Details
GO ID
GO:0042644,GO:0015036,GO:0047134,GO:0009579,GO:0006952,GO:0045454,GO:0009657,GO:0015035,GO:0009507
GO Description Details
GOslim ID
GO:0009579,GO:0043232,GO:0050896,GO:0016491,GO:0009657,GO:0065008,GO:0050789,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Thioredoxin-like protein CITRX, chloroplastic
OrthoDB(1 item)
196198at33090
Thioredoxin
Pfam(1 item)
 
Thioredoxin
InterPro(2 items)
 
Thioredoxin domain
 
Thioredoxin-like_sf
Gene ontology(9 items)
CC
chloroplast nucleoid
MF
disulfide oxidoreductase activity
MF
protein-disulfide reductase activity
BP
defense response
BP
cell redox homeostasis
BP
plastid organization
MF
protein disulfide oxidoreductase activity
GO slim(8 items)
CC
intracellular non-membrane-bounded organelle
BP
response to stimulus
MF
oxidoreductase activity
BP
plastid organization
BP
regulation of biological quality
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.