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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G05800.1
PEP
AT3G05800.1
Position on the Genome Chromosome Chr3
Start Position 1727476
End Position 1728111
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00647162
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor bHLH150
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor bHLH150
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR011598,IPR036638
InterPro Description Details
GO ID
GO:0006355,GO:0003700,GO:0046983,GO:0005634,GO:0009742,GO:0003677
GO Description Details
GOslim ID
GO:0003676,GO:0005634,GO:0050789,GO:0006351,GO:0065009,GO:0005515,GO:0050896,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor bHLH150
OrthoDB(1 item)
207024at33090
Transcription factor bHLH150
InterPro(2 items)
 
Myc-type, basic helix-loop-helix (bHLH) domain
 
HLH_DNA-bd_sf
Gene ontology(6 items)
BP
regulation of transcription, DNA-templated
MF
DNA-binding transcription factor activity
MF
protein dimerization activity
BP
brassinosteroid mediated signaling pathway
GO slim(8 items)
MF
nucleic acid binding
BP
regulation of biological process
BP
transcription, DNA-templated
BP
regulation of molecular function
MF
protein binding
BP
response to stimulus
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.