Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G04530.1
PEP
AT3G04530.1
Position on the Genome Chromosome Chr3
Start Position 1221546
End Position 1222456
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00590679
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
PPCK2
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00069
Pfam Description Details
InterPro ID
IPR011009,IPR000719,IPR017441,IPR008271
InterPro Description Details
GO ID
GO:0004674,GO:0005524
GO Description Details
GOslim ID
GO:0016740,GO:0006793,GO:0006464,GO:0043167,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
129542at33090
Protein kinase domain
Pfam(1 item)
 
Protein kinase domain
InterPro(4 items)
 
Kinase-like_dom_sf
 
Protein kinase domain
 
Protein_kinase_ATP_BS
 
Ser/Thr_kinase_AS
Gene ontology(2 items)
MF
protein serine/threonine kinase activity
GO slim(5 items)
MF
transferase activity
BP
phosphorus metabolic process
BP
cellular protein modification process
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.