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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G04070.1
PEP
AT3G04070.1
Position on the Genome Chromosome Chr3
Start Position 1061573
End Position 1062976
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00191487
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
NAC domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
NAC transcription factor 47
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02365
Pfam Description Details
InterPro ID
IPR003441,IPR036093
InterPro Description Details
GO ID
GO:0009413,GO:0003700,GO:0005634,GO:0003677,GO:0009793,GO:0010365
GO Description Details
GOslim ID
GO:0005634,GO:0003676,GO:0006790,GO:0000003,GO:0006351,GO:0050789,GO:0043449,GO:0065009,GO:0009308,GO:0050896,GO:0042180,GO:0006520,GO:0032501,GO:0032502
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
NAC family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
NAC transcription factor 47
OrthoDB(1 item)
163509at33090
NAC domain
Pfam(1 item)
 
No apical meristem (NAM) protein
InterPro(2 items)
Gene ontology(6 items)
BP
response to flooding
MF
DNA-binding transcription factor activity
BP
embryo development ending in seed dormancy
BP
positive regulation of ethylene biosynthetic process
GO slim(14 items)
MF
nucleic acid binding
BP
sulfur compound metabolic process
BP
transcription, DNA-templated
BP
regulation of biological process
BP
cellular alkene metabolic process
BP
regulation of molecular function
BP
amine metabolic process
BP
response to stimulus
BP
cellular ketone metabolic process
BP
cellular amino acid metabolic process
BP
multicellular organismal process
BP
developmental process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.