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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G02380.1
PEP
AT3G02380.1
Position on the Genome Chromosome Chr3
Start Position 487438
End Position 488624
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00405851
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CCT domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Zinc finger protein CONSTANS-LIKE 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF06203,PF00643
Pfam Description Details
InterPro ID
IPR010402,IPR000315
InterPro Description Details
GO ID
GO:0003700,GO:0005634,GO:0003677,GO:0008270,GO:0009909,GO:0009658
GO Description Details
GOslim ID
GO:0050789,GO:0032502,GO:0065009,GO:0009657,GO:0032501,GO:0005634,GO:0003676,GO:0000003,GO:0043167,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
CO-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Zinc finger protein CONSTANS-LIKE 2
OrthoDB(1 item)
138320at33090
CCT domain
Pfam(2 items)
 
CCT motif
 
B-box zinc finger
InterPro(2 items)
 
B-box-type zinc finger
Gene ontology(6 items)
MF
DNA-binding transcription factor activity
MF
zinc ion binding
BP
regulation of flower development
BP
chloroplast organization
GO slim(10 items)
BP
regulation of biological process
BP
developmental process
BP
regulation of molecular function
BP
plastid organization
BP
multicellular organismal process
MF
nucleic acid binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.