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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G01920.2
PEP
AT3G01920.2
Position on the Genome Chromosome Chr3
Start Position 317449
End Position 319001
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01474246
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
YrdC-like domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
DHBP synthase RibB-like alpha/beta domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01300
Pfam Description Details
InterPro ID
IPR017945,IPR006070
InterPro Description Details
GO ID
GO:0003725
GO Description Details
GOslim ID
GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
DHBP synthase RibB-like alpha/beta domain-containing protein
OrthoDB(1 item)
140636at33090
YrdC-like domain
Pfam(1 item)
 
Telomere recombination
InterPro(2 items)
 
DHBP_synth_RibB-like_a/b_dom
 
YrdC-like domain
Gene ontology(1 item)
MF
double-stranded RNA binding
GO slim(1 item)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.