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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G46510.1
PEP
AT2G46510.1
Position on the Genome Chromosome Chr2
Start Position 19091187
End Position 19092887
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00308185
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor ABA-INDUCIBLE bHLH-TYPE
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14215,PF00010
Pfam Description Details
InterPro ID
IPR011598,IPR025610,IPR036638
InterPro Description Details
GO ID
GO:0006355,GO:0009737,GO:0000976,GO:0009738,GO:0010629,GO:0005634,GO:0009611,GO:0046983,GO:0043565,GO:0003700
GO Description Details
GOslim ID
GO:0005634,GO:0050789,GO:0003676,GO:0050896,GO:0043170,GO:0006351,GO:0065009,GO:0005515,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor ABA-INDUCIBLE bHLH-TYPE
OrthoDB(1 item)
57236at33090
Myc-type, basic helix-loop-helix (bHLH) domain
Pfam(2 items)
 
bHLH-MYC and R2R3-MYB transcription factors N-terminal
 
Helix-loop-helix DNA-binding domain
InterPro(3 items)
 
Myc-type, basic helix-loop-helix (bHLH) domain
 
Transcription factor MYC/MYB N-terminal
 
HLH_DNA-bd_sf
Gene ontology(10 items)
BP
regulation of transcription, DNA-templated
BP
response to abscisic acid
MF
transcription regulatory region sequence-specific DNA binding
BP
abscisic acid-activated signaling pathway
BP
negative regulation of gene expression
BP
response to wounding
MF
protein dimerization activity
MF
sequence-specific DNA binding
MF
DNA-binding transcription factor activity
GO slim(9 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
response to stimulus
BP
macromolecule metabolic process
BP
transcription, DNA-templated
BP
regulation of molecular function
MF
protein binding
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.