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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G46400.1
PEP
AT2G46400.1
Position on the Genome Chromosome Chr2
Start Position 19043676
End Position 19044754
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00554080
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WRKY domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable WRKY transcription factor 46
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03106
Pfam Description Details
InterPro ID
IPR036576,IPR003657
InterPro Description Details
GO ID
GO:0005634,GO:0000976,GO:0009751,GO:0010200,GO:0000987,GO:0042742,GO:0009742,GO:0048527,GO:0006355,GO:1900457,GO:0071456,GO:2000022,GO:0009617,GO:0043565,GO:0005730,GO:0003700,GO:2000070
GO Description Details
GOslim ID
GO:0050896,GO:0050789,GO:0005730,GO:0032502,GO:0044419,GO:0007154,GO:0065009,GO:0006351,GO:0003676,GO:0005634,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
WRKY family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Probable WRKY transcription factor 46
OrthoDB(1 item)
186459at33090
WRKY domain
Pfam(1 item)
 
WRKY DNA -binding domain
InterPro(2 items)
Gene ontology(17 items)
MF
transcription regulatory region sequence-specific DNA binding
BP
response to salicylic acid
BP
response to chitin
MF
cis-regulatory region sequence-specific DNA binding
BP
defense response to bacterium
BP
brassinosteroid mediated signaling pathway
BP
lateral root development
BP
regulation of transcription, DNA-templated
BP
regulation of brassinosteroid mediated signaling pathway
BP
cellular response to hypoxia
BP
regulation of jasmonic acid mediated signaling pathway
BP
response to bacterium
MF
sequence-specific DNA binding
MF
DNA-binding transcription factor activity
BP
regulation of response to water deprivation
GO slim(11 items)
BP
response to stimulus
BP
regulation of biological process
BP
developmental process
BP
interspecies interaction between organisms
BP
cell communication
BP
regulation of molecular function
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.