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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G46110.1
PEP
AT2G46110.1
Position on the Genome Chromosome Chr2
Start Position 18954807
End Position 18956411
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00228779
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
3-methyl-2-oxobutanoate hydroxymethyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
3-methyl-2-oxobutanoate hydroxymethyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02548
Pfam Description Details
InterPro ID
IPR003700,IPR040442,IPR015813
InterPro Description Details
GO ID
GO:0003864,GO:0015940
GO Description Details
GOslim ID
GO:0016740,GO:0006082,GO:0043603,GO:0006766
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
3-methyl-2-oxobutanoate hydroxymethyltransferase
OrthoDB(1 item)
120396at33090
3-methyl-2-oxobutanoate hydroxymethyltransferase
Pfam(1 item)
 
Ketopantoate hydroxymethyltransferase
InterPro(3 items)
 
Ketopantoate hydroxymethyltransferase
 
Pyrv_Kinase-like_dom_sf
 
Pyrv/PenolPyrv_Kinase-like_dom
Gene ontology(2 items)
MF
3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BP
pantothenate biosynthetic process
GO slim(4 items)
MF
transferase activity
BP
organic acid metabolic process
BP
cellular amide metabolic process
BP
vitamin metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.