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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G45100.1
PEP
AT2G45100.1
Position on the Genome Chromosome Chr2
Start Position 18595348
End Position 18598088
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00089087
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cyclin-like
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07741,PF00382
Pfam Description Details
InterPro ID
IPR036915,IPR013150,IPR011665,IPR013763,IPR029529,IPR000812
InterPro Description Details
GO ID
GO:0000995,GO:0000126,GO:0017025,GO:0070897
GO Description Details
GOslim ID
GO:0006351,GO:0005667,GO:0065009,GO:0065003,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
147652at33090
Cyclin-like
Pfam(2 items)
 
Brf1-like TBP-binding domain
 
Transcription factor TFIIB repeat
InterPro(6 items)
 
Cyclin-like_sf
 
Transcription factor TFIIB, cyclin-like domain
 
Brf1, TBP-binding domain
Gene ontology(4 items)
MF
RNA polymerase III general transcription initiation factor activity
CC
transcription factor TFIIIB complex
MF
TBP-class protein binding
BP
transcription preinitiation complex assembly
GO slim(5 items)
BP
transcription, DNA-templated
CC
transcription regulator complex
BP
regulation of molecular function
BP
protein-containing complex assembly
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.