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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G44840.1
PEP
AT2G44840.1
Position on the Genome Chromosome Chr2
Start Position 18495440
End Position 18496120
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00646756
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AP2/ERF domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ethylene-responsive transcription factor 13
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00847
Pfam Description Details
InterPro ID
IPR016177,IPR036955,IPR001471
InterPro Description Details
GO ID
GO:0003677,GO:0003700,GO:0010200,GO:0009873,GO:0005634,GO:0006952
GO Description Details
GOslim ID
GO:0050896,GO:0050789,GO:0003676,GO:0005634,GO:0006351,GO:0007154,GO:0005575,GO:0065009
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ERF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G44840
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ethylene-responsive transcription factor 13
OrthoDB(1 item)
208952at33090
AP2/ERF domain
Pfam(1 item)
 
AP2 domain
InterPro(3 items)
 
DNA-bd_dom_sf
 
AP2/ERF_dom_sf
 
AP2/ERF domain
Gene ontology(6 items)
MF
DNA-binding transcription factor activity
BP
response to chitin
BP
ethylene-activated signaling pathway
BP
defense response
GO slim(8 items)
BP
response to stimulus
BP
regulation of biological process
MF
nucleic acid binding
BP
transcription, DNA-templated
BP
cell communication
CC
cellular_component
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.